pTools v1.0.0


python3, samtools, numpy, biopython


This bundle has 5 modules:
10xscell: To create pFastq files for 10x v2 single-cell RNA-Seq data
diff: To create a diff file given a BAM file
genome: To create a pBAM file from a genome aligned BAM file (whether it is bulk or single-cell)
transcriptome: To create a pBAM file from a transcriptome aligned BAM file
pbam2bam: To re-create BAM file given a pBAM and diff file